You'd likely face challenges including:
* Engine Control Module (ECM) incompatibility: The 1996's computer won't understand the signals from the 1994 engine's sensors, and vice versa. This requires significant rewiring, potentially including a complete ECM swap and possibly extensive modifications to the wiring harness.
* Sensor differences: Even if you managed the ECM, the sensors themselves might have different connectors or operating parameters.
* Exhaust system: The exhaust system may not be compatible.
* Transmission compatibility: While the transmissions might *seem* compatible, there could be subtle differences requiring modifications or adapter plates.
In short, it's not impossible, but it's a major undertaking requiring significant mechanical and electrical expertise. It would be far more complex than a simple engine swap in cars with more consistent systems across model years. You'd be better off looking for a replacement engine that's a direct fit for the 1996 model year.